BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008H10SP1|AL425948
(821 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1409 1581 0.0
>3x_Contig1409
Length = 9404
Score = 1581 bits (797), Expect = 0.0
Identities = 819/823 (99%), Gaps = 3/823 (0%)
Strand = Plus / Minus
Query: 1 acacaatcttaggaccactaaaattgcagcggatttccagaatcctggatatagcttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3192 acacaatcttaggaccactaaaattgcagcggatttccagaatcctggatatagcttttt 3133
Query: 61 gatcttaagtctgcctaatgttgctcccaaaagcatcaatccaaaaggcactgatgcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3132 gatcttaagtctgcctaatgttgctcccaaaagcatcaatccaaaaggcactgatgcatt 3073
Query: 121 tcctaagtatcctgtataatccataatgaaattcagagcc-ggctgaccgtctggtgctg 179
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3072 tcctaagtatcctgtataatccataatgaaattcagagcccggctgaccgtctggtgctg 3013
Query: 180 gatgaatgtacggtccattggaggtagtaacgaacagagccttaagccaaggaatgaatg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3012 gatgaatgtacggtccattggaggtagtaacgaacagagccttaagccaaggaatgaatg 2953
Query: 240 caataagtaatgctaggaaaacagccatcgaacacggtcttaaaaagttcttgaggaaga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2952 caataagtaatgctaggaaaacagccatcgaacacggtcttaaaaagttcttgaggaaga 2893
Query: 300 aaagcagtacactcataccaggaatatttctgactctcgagggtaaaatgttagctgatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2892 aaagcagtacactcataccaggaatatttctgactctcgagggtaaaatgttagctgatt 2833
Query: 360 ctttgatatcttggccagttacggtagcatctgatgtgacaattctcttcaaagttgtga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2832 ctttgatatcttggccagttacggtagcatctgatgtgacaattctcttcaaagttgtga 2773
Query: 420 actcttttctaagagggacctgacctgaatcctcggtttcgggttttatggtggatgtaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2772 actcttttctaagagggacctgacctgaatcctcggtttcgggttttatggtggatgtaa 2713
Query: 480 cagaatttctgcgagctccgtattggtctacattagagtattcttttattaaatcgtgaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2712 cagaatttctgcgagctccgtattggtctacattagagtattcttttattaaatcgtgaa 2653
Query: 540 cattttccggaggcatagatcttaggtcaatcgaccttagcgatgaactgagagactggg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2652 cattttccggaggcatagatcttaggtcaatcgaccttagcgatgaactgagagactggg 2593
Query: 600 cactggccgccgttgcattagtaaggcgccttgaacattacattatcctcagcaagctgt 659
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2592 cactggccgccgttgcattagtaaggcgccttgaa-attacattatcctcagcaagctgt 2534
Query: 660 attggagaagtaacagcttcctgagaattgatggaatttacagcacgatcgttttctttt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2533 attggagaagtaacagcttcctgagaattgatggaatttacagcacgatcgttttctttt 2474
Query: 720 gaacagaatgattgtgaatmagtttgaagatgaaactgagatgcattagattgcgc-ggt 778
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 2473 gaacagaatgattgtgaatcagtttgaagatgaaactgagatgcattagattgcgcaggt 2414
Query: 779 ggttcgagtggtgtctgaatagaggcattctcctcatccgcgt 821
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2413 ggttcgagtggtgtctgaatagaggcattctcctcatccgcgt 2371
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5266
Number of Sequences: 1807
Number of extensions: 5266
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 821
length of database: 10,358,551
effective HSP length: 16
effective length of query: 805
effective length of database: 10,329,639
effective search space: 8315359395
effective search space used: 8315359395
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)